Codon
- Found on mRNA
- Three RNA bases
- Codes for an amino acid or stop signal
AP Biology · Unit 6 Gene Expression
Transcription and translation are the two main steps of gene expression. Transcription copies DNA information into RNA. Translation reads mRNA codons to build a polypeptide. For AP Biology, the key is tracing information from DNA → RNA → protein → phenotype.
Teacher tip: If you get confused, ask two questions: What molecule is being made? Where is the genetic message being read?

Transcription copies information from DNA into RNA. Translation uses the RNA message to build a polypeptide. In eukaryotes, transcription happens in the nucleus, while translation happens at ribosomes in the cytoplasm or rough ER.
Transcription = DNA → RNA. Translation = RNA → protein.
| Feature | Transcription | Translation |
|---|---|---|
| Purpose | Copy gene information from DNA into RNA | Build a polypeptide from an RNA message |
| Starting molecule | DNA (template strand of a gene) | mRNA (mature messenger RNA) |
| Product | RNA (usually mRNA for protein-coding genes) | Polypeptide that can fold into a protein |
| Location in eukaryotes | Nucleus | Cytoplasm at ribosomes (free or on rough ER) |
| Main enzyme or structure | RNA polymerase | Ribosome (rRNA + proteins) |
| Key molecules | DNA template, RNA nucleotides, RNA polymerase | mRNA, tRNA, amino acids, ribosome |
| Base-pairing role | RNA pairs with DNA template (U with A on DNA) | tRNA anticodons pair with mRNA codons |
| When it happens | Before translation; after a gene is activated | After mature mRNA reaches the cytoplasm |
| AP exam clue | RNA polymerase, promoter, nucleus, U replaces T | Ribosome, codon chart, tRNA, peptide bonds |
| Common mistake | Saying transcription makes protein | Saying translation makes RNA |
DNA stores genetic information in a stable double helix. Transcription copies that information into RNA. In eukaryotes, RNA processing prepares pre-mRNA into mature mRNA. Translation reads mRNA codons to build a polypeptide. Proteins carry out cell functions and can affect observable traits (phenotype).
Gene expression connects molecular biology to what you observe in organisms. A mutation in DNA can change an mRNA codon, alter an amino acid, change protein shape, and shift phenotype—exactly the reasoning chain AP FRQs reward.
For silent, missense, nonsense, and frameshift practice, see the mutations AP Biology guide.
When a prompt connects molecular change to population-level patterns, review natural selection in Unit 7 and Hardy-Weinberg equilibrium for how allele frequencies respond over generations.

During transcription, RNA polymerase binds near a gene, DNA strands separate, and one DNA strand acts as a template. Complementary RNA nucleotides are added; RNA uses uracil instead of thymine. The RNA transcript is released when transcription ends.
Transcription assumes DNA was already copied accurately. Review DNA replication if you need semiconservative copying and enzyme logic first.
DNA template: TAC → mRNA codon: AUG
Eukaryotic pre-mRNA is modified before translation. A 5′ cap is added, a poly-A tail is added, introns are removed, exons are spliced together, and mature mRNA exits the nucleus through nuclear pores.

During translation, mRNA attaches to a ribosome. The ribosome reads codons, tRNA brings amino acids, anticodons pair with codons, amino acids join into a polypeptide, and the polypeptide can fold into a functional protein.

AP Biology questions often ask you to identify which process is happening, predict RNA from a DNA template, use a codon chart, explain how a mutation changes a protein, connect a protein change to phenotype, and interpret experimental data about gene expression.
→ Transcription
→ Transcription
→ RNA processing after transcription
→ Eukaryotic RNA processing
→ Translation
→ Translation
→ Translation / amino acid sequence
→ Translation
→ Transcription in nucleus; translation in cytoplasm
→ Trace DNA → mRNA → protein flow
Viral gene expression contrasts with typical eukaryotic flow—compare patterns on the viruses and bacteria study guide when a prompt involves phage or bacterial systems.
Fix: Transcription makes RNA.
Fix: Translation makes a polypeptide.
Fix: Codons are on mRNA; anticodons are on tRNA.
Fix: Eukaryotic pre-mRNA is processed before translation.
Fix: In eukaryotes, mRNA leaves the nucleus, not DNA.
Fix: Some mutations are silent or have no major effect.
| Term | Meaning | AP exam clue |
|---|---|---|
| DNA | Stores genetic information in a double helix | Template for transcription |
| RNA | Single-stranded nucleic acid message | Product of transcription |
| Gene | A DNA segment that codes for a functional product | Transcription unit |
| Template strand | DNA strand read 3′→5′ during transcription | Complementary to mRNA |
| Coding strand | DNA strand with same sequence as mRNA (T→U) | Not the template |
| RNA polymerase | Enzyme that synthesizes RNA from DNA | Transcription enzyme |
| Transcription | DNA → RNA copying process | Happens in nucleus (eukaryotes) |
| pre-mRNA | Initial RNA transcript before processing | Needs splicing in eukaryotes |
| mRNA | Mature messenger RNA that carries codons | Template for translation |
| 5′ cap | Modified guanine added to pre-mRNA front | Protects mRNA; ribosome recognition |
| poly-A tail | String of adenines added to pre-mRNA 3′ end | Protects from degradation |
| Intron | Non-coding region removed from pre-mRNA | Spliced out in eukaryotes |
| Exon | Coding region kept in mature mRNA | Joined after splicing |
| Splicing | Removal of introns and joining of exons | Eukaryotic RNA processing |
| Translation | mRNA → polypeptide process at ribosomes | Uses codon chart |
| Ribosome | Site of translation; reads mRNA codons | Peptide bond formation |
| Codon | Three RNA bases on mRNA | Codes for amino acid or stop |
| Anticodon | Three bases on tRNA complementary to codon | On tRNA, not mRNA |
| tRNA | Carries amino acids to ribosome | Anticodon matches codon |
| Amino acid | Building block of polypeptides | Delivered by tRNA |
| Polypeptide | Chain of amino acids linked by peptide bonds | Product of translation |
| Protein | Folded functional polypeptide (often) | Affects cell function |
| Start codon | AUG; signals start of translation | Codes for methionine |
| Stop codon | UAA, UAG, or UGA; ends translation | No amino acid added |
| Mutation | Change in DNA sequence | Can alter mRNA and protein |
| Phenotype | Observable trait or function | Protein change can affect phenotype |
Flip all 25 cards until you can trace DNA → RNA → protein without hesitating on enzymes, locations, and codon rules.
Answer all 15 questions. Choices shuffle on reload—focus on information flow, not letter memorization.
Open each card, draft your response, then reveal the rubric and sample answer.
A DNA template strand changes from TAC to TAT. Predict the mRNA codon and explain a possible effect on the protein.
Transcription copies the DNA template into mRNA using complementary base pairing. TAC on the template produces AUG in mRNA; TAT produces AUA. If this codon is the start codon, the first amino acid could change from methionine to isoleucine, potentially altering protein structure and function.
Status: Draft your answer first—then open the rubric or sample.
A mutation changes an mRNA codon from GAA to UAA. Explain the likely protein effect.
During translation, ribosomes read mRNA codons. GAA codes for glutamic acid, but UAA is a stop codon. The ribosome would terminate translation early, producing a shorter polypeptide missing downstream amino acids. The protein is likely nonfunctional.
Status: Draft your answer first—then open the rubric or sample.
A cell blocks RNA polymerase activity. Predict how mRNA and protein production change.
RNA polymerase transcribes DNA into mRNA. Blocking it stops transcription, so little or no mRNA is produced. Without mRNA, ribosomes cannot translate codons into a polypeptide, so protein production drops. Gene expression decreases, which can change cell function and phenotype.
Status: Draft your answer first—then open the rubric or sample.
Transcription copies DNA information into RNA. Translation uses mRNA codons to build a polypeptide at ribosomes.
Yes. The cell must make RNA from DNA before ribosomes can translate that message into a protein.
In eukaryotes, transcription occurs in the nucleus where DNA is located. In prokaryotes, it occurs in the cytoplasm.
Translation occurs at ribosomes in the cytoplasm or on the rough endoplasmic reticulum.
Transcription produces RNA, usually mRNA for protein-coding genes.
Translation produces a polypeptide that can fold into a functional protein.
mRNA carries the genetic code from DNA to ribosomes as a series of codons.
A codon is a three-base sequence on mRNA. An anticodon is on tRNA and pairs complementarily with a codon.
During transcription, RNA pairs with DNA using uracil where DNA has adenine. RNA is short-lived, so uracil is sufficient for messaging.
A mutation can change mRNA codons, alter amino acid sequence, create stop codons, or produce nonfunctional proteins that change phenotype.